Georgia Institute of TechnologyCSSB
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Klaus J. Schulten

Swanlund Professor, Department of Physics
Professor, Department of Chemistry
Member, Beckman Institute
University of Illinois Urbana-Champaign

Date: Wednesday, December 13, 2006
Time: 11AM-12PM
Location: IBB 1128

"Petascale Computing in the Biosciences - Simulating Entire Life Forms"


Klaus J. Schulten

Abstract: Living cells are made of atoms that are organized in molecules and their hierarchical assemblies. Most lasting advances in our understanding of the building blocks of living systems, for example genes, proteins, membranes, were based on atomic level structures and resulting properties, computing playing a key role. The question arises if these types of advances can be extended to explain the self-organization of complete living systems, i.e., if an entire cell can be resolved structurally to the atomic level and then its self-organized behavior deduced from physical principles. This lecture demonstrates through examples in how far a description of life from atomic properties and pure physics is already achievable today and may reach further with advances in microscopy, multi-scale theory, and petascale computing. Examples to be provided will include the self-assembly of proteins and lipids, simulation of a virus, swimming of bacteria and, lastly, the atomic level description of an entire cellular organelle, the photosynthetic apparatus of purple bacteria. The lecture links present day achievement in modeling technology and computational discovery with petascale era prospects to demonstrate that the biosciences are ready for petascale computing.

Hosted by: John McDonald