FINDSITE

Reference: Brylinski M, Skolnick J. (2008) A threading-based method (FINDSITE) for ligand-binding site prediction and functional annotation. Proc Natl Acad Sci U S A 105, 129-34. PDF

Download FINDSITE and benchmark sets

Datasets:

FINDSITE Benchmark Set

Function Annotation:

FINDSITE Annotations

GO Statistics

Supporting Information for the work presented in

Brylinski M, Skolnick J. (2009) Comparison of structure- and threading-based approaches to protein functional annotation. Proteins 2009:78(1): 118-134. PDF

Structure-based Approach:

Binding Pockets

Molecular Function

Virtual Screening

Threading-based Approach (FINDSITE):

Binding Pockets

Molecular Function

Virtual Screening