Dr. Tadashi Ando
Postdoctoral Fellow
Tadashi Ando
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Contact information:
- Center for the Study of Systems Biology
- Skolnick Lab
- Tel:(404) 407-8974
- Fax:(404) 385-7478
- Email:tando3@mail.gatech.edu
Research Interests
- Protein folding simulation
- Dynamics of proteins in crowded cellular environments
- Simulating biological systems
- Self-organization in biology
List of publications:
| [7] | Yamato I, Ando T, Suzuki A, Harada K, Itoh S, Miyazaki S, Kobayashi N, Takeda M. (2007): "Toward in silico biology (from sequences to systems)" International Symposium of Quantum Bio-Informatics Research Center 2007, pp 440-455, World Scientific, New York |
| [6] | Suzuki A, Ando T, Yamato I, Miyazaki S. (2006) "FCANAL: Structure based protein function prediction method. Application to enzymes and binding proteins" Chemo-Bio Informatics Journal 5, 39-55 |
| [5] | Ando T, Yamato I. (2005) "Free energy landscapes of two model peptides: a-helical and ß-hairpin peptides explored with Brownian dynamics simulation" Molecular Simulation 31, 683-693 |
| [4] | Ando T, Meguro T, Yamato I. (2004) "A new implicit solvent model for Brownian dynamics simulation: Solvent-accessible surface area dependent effective charge model" Journal of Computer Chemistry, Japan 3, 129-136 |
| [3] | Ando T, Meguro T, Yamato I. (2003) "Multiple time step Brownian dynamics for long time simulation of biomolecules" Molecular Simulation 29, 471-478 |
| [2] | Asaoka T, Ando T, Meguro T, Yamato I. (2003) "Development of a structure based protein function prediction method: Calcium binding protein" Chemo-Bio Informatics Journal 3, 96-113 |
| [1] | Ando T, Meguro T, Yamato I. (2002) "Development of an atomistic Brownian dynamics algorithm with implicit solvent model for long time simulation" Journal of Computer Chemistry, Japan 1, 103-110 |