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2011
Skolnick, J, Friesner R.  2011.  Editorial overview. Current Opinion in Structural Biology. 21:147-149. PDF
Ando, T, Skolnick J.  2011.  Brownian dynamics simulation of macromolecule diffusion in a protocell. Proceedings of the International Conference of the Quantum Bio-Informatics IV. 28:413-426. PDF
Guan, W, Ozakin A, Gray A, Borreguero J, Pandit S, Jagielska A, Wroblewska L, Skolnick J.  2011.  Learning Protein Folding Energy Functions. 2011 IEEE 11th International Conference on Data Mining (ICDM)2011 IEEE 11th International Conference on Data Mining. :1062-1067. PDF
2010
Ando, T, Skolnick J.  2010.  Crowding and hydrodynamic interactions likely dominate in vivo macromolecular motion. Proceedings of the National Academy of Sciences of the United States of America. 107:18457-18462. PDF Supplementary Data
Gao, M, Skolnick J.  2010.  Structural space of protein-protein interfaces is degenerate, close to complete, and highly connected. Proceedings of the National Academy of Sciences of the United States of America. 107(52):22517-22. PDF Supplementary Data Abstract
Pandit, S B, Zhou H, Skolnick J.  2010.  TASSER-based protein structure prediction. Introduction to Protein Structure Prediction: Methods and Algorithms. 14:219-242. PDF
2009
Skolnick, J, Brylinski M.  2009.  Novel computational approaches to drug discovery. Proceedings of the International Conference of the Quantum Bio-Informatics III. PDF
Skolnick, J, Arakaki AK, Lee SY, Brylinski M.  2009.  The continuity of protein structure space is an intrinsic property of proteins. Proceedings of the National Academy of Sciences of the United States of America. 106(37):15690-5. PDF Abstract
Skolnick, J, Friesner RA.  2009.  Theory and Simulation (Editorial overview). Current opinion in structural biology. 19(2):117-9. PDF Abstract
2008
Jagielska, A, Wroblewska L, Skolnick J.  2008.  Protein model refinement using an optimized physics-based all-atom force field. Proceedings of the National Academy of Sciences of the United States of America. 105(24):8268-73. PDF Abstract
Brylinski, M, Skolnick J.  2008.  A threading-based method (FINDSITE) for ligand-binding site prediction and functional annotation. Proceedings of the National Academy of Sciences of the United States of America. 105(1):129-34. PDF Supplementary Data Abstract
2007