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Roterman, I, Brylinski M, Konieczny L.  2009.  Active site recognition in silico. Structure-function relation in proteins. 1:105-127.
Kolinski, A, Rotkiewicz P, Skolnick J.  1998.  Application of a high coordination lattice model in protein structure prediction. Workshop on Monte Carlo Approach to Biopolymers and Protein Folding. :377-388. PDF
Zhang, Y, Skolnick J.  2004.  Automated structure prediction of weakly homologous proteins on a genomic scale. Proceedings of the National Academy of Sciences of the United States of America. 101(20):7594-9. PDF Supplementary Data Abstract
Hammes, GG, Skolnick J.  2012.  Biography of Harold A. Scheraga. The Journal of Physical Chemistry B. 116(23):6572-6572. PDF
Ando, T, Skolnick J.  2011.  Brownian dynamics simulation of macromolecule diffusion in a protocell. Proceedings of the International Conference of the Quantum Bio-Informatics IV. 28:413-426. PDF